Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_054184469.1
HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1 [Homo sapiens]
...
Query length:
219 aa
DOMAINS: and other(s) domains
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rano class II histocompatibility antigen, D-1 beta chain isoform X1
...
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
major histocompatibility complex class II DAA precursor
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major histocompatibility complex class II DAA precursor [Danio rerio]
236 aa protein
accession:NP_001004521.3
class II histocompatibility antigen, M alpha chain precursor
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class II histocompatibility antigen, M alpha chain precursor [Mus musculus]
261 aa protein
accession:NP_001411717.1
HLA class II histocompatibility antigen, DR alpha chain precursor
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HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
Query: HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1
...
HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1 [Homo sapiens]
219 aa protein
accession:XP_054184469.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor
...
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
DOMAINS: and other(s) domains
...
rano class II histocompatibility antigen, D-1 beta chain isoform X1 [Rattus norvegicus]
281 aa protein
accession:XP_063135086.1
major histocompatibility complex class II DAA precursor [Danio rerio]
236 aa protein
accession:NP_001004521.3
class II histocompatibility antigen, M alpha chain precursor [Mus musculus]
261 aa protein
accession:NP_001411717.1
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1 [Homo sapiens]
219 aa protein
accession:XP_054184469.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 440 | 440 | 95% | 3e-158 | 100.00% | NP_001229453.1 | |
| 2 | 113 | 113 | 76% | 7e-30 | 35.67% | NP_001004521.3 | |
| 3 | 77.8 | 77.8 | 74% | 2e-16 | 30.18% | NP_001411717.1 | |
| 4 | 70.1 | 70.1 | 42% | 2e-13 | 33.70% | XP_063135086.1 | |
| 5 | 248 | 248 | 89% | 2e-82 | 61.22% | NP_061984.2 |