Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_054186788.1
major histocompatibility complex, class II, DR beta 4 isoform X5 [Homo sapiens]
...
Query length:
370 aa
DOMAINS: and other(s) domains
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H-2 class II histocompatibility antigen, I-E beta chain precursor
...
H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
major histocompatibility complex, class II, DR beta 4 precursor
...
major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
major histocompatibility complex, class II, DR beta 4 isoform X1
...
major histocompatibility complex, class II, DR beta 4 isoform X1 [Homo sapiens]
266 aa protein
accession:XP_054186560.1
Query: major histocompatibility complex, class II, DR beta 4 isoform X5
...
major histocompatibility complex, class II, DR beta 4 isoform X5 [Homo sapiens]
370 aa protein
accession:XP_054186788.1
major histocompatibility complex, class II, DR beta 4 isoform X6
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major histocompatibility complex, class II, DR beta 4 isoform X6 [Homo sapiens]
370 aa protein
accession:XP_054186789.1
major histocompatibility complex, class II, DR beta 4 isoform X8
...
major histocompatibility complex, class II, DR beta 4 isoform X8 [Homo sapiens]
262 aa protein
accession:XP_054186791.1
DOMAINS: and other(s) domains
...
H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]
264 aa protein
accession:NP_034512.2
major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
major histocompatibility complex, class II, DR beta 4 isoform X1 [Homo sapiens]
266 aa protein
accession:XP_054186560.1
major histocompatibility complex, class II, DR beta 4 isoform X5 [Homo sapiens]
370 aa protein
accession:XP_054186788.1
major histocompatibility complex, class II, DR beta 4 isoform X6 [Homo sapiens]
370 aa protein
accession:XP_054186789.1
major histocompatibility complex, class II, DR beta 4 isoform X8 [Homo sapiens]
262 aa protein
accession:XP_054186791.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 765 | 765 | 100% | 0.0 | 99.46% | XP_054186789.1 | |
| 2 | 348 | 348 | 62% | 3e-119 | 75.76% | NP_034512.2 | |
| 3 | 488 | 488 | 65% | 5e-174 | 97.11% | NP_068818.4 | |
| 4 | 482 | 482 | 65% | 6e-172 | 95.85% | XP_054186791.1 | |
| 5 | 481 | 481 | 65% | 2e-171 | 95.87% | XP_054186560.1 |