Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_056506612.1
Ribonucleoprotein LSM domain eukaryotic/archaea-type [Penicillium alfredii]
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Query length:
87 aa
DOMAINS: and other(s) domains
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probable small nuclear ribonucleoprotein G isoform X2
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probable small nuclear ribonucleoprotein G isoform X2 [Glycine max]
78 aa protein
accession:XP_040868607.1
Query: Ribonucleoprotein LSM domain eukaryotic/archaea-type
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Ribonucleoprotein LSM domain eukaryotic/archaea-type [Penicillium alfredii]
87 aa protein
accession:XP_056506612.1
small nuclear ribonucleoprotein E
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small nuclear ribonucleoprotein E [Dictyostelium discoideum AX4]
92 aa protein
accession:XP_002649120.1
small nuclear ribonucleoprotein E isoform X2
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small nuclear ribonucleoprotein E isoform X2 [Rattus norvegicus]
92 aa protein
accession:XP_063128007.1
small nuclear ribonucleoprotein E, putative
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small nuclear ribonucleoprotein E, putative [Plasmodium falciparum 3D7]
93 aa protein
accession:XP_001350215.1
mRNA splicing protein SME1
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mRNA splicing protein SME1 [Saccharomyces cerevisiae S288C]
94 aa protein
accession:NP_014802.3
DOMAINS: and other(s) domains
...
probable small nuclear ribonucleoprotein G isoform X2 [Glycine max]
78 aa protein
accession:XP_040868607.1
Ribonucleoprotein LSM domain eukaryotic/archaea-type [Penicillium alfredii]
87 aa protein
accession:XP_056506612.1
small nuclear ribonucleoprotein E [Dictyostelium discoideum AX4]
92 aa protein
accession:XP_002649120.1
small nuclear ribonucleoprotein E isoform X2 [Rattus norvegicus]
92 aa protein
accession:XP_063128007.1
small nuclear ribonucleoprotein E, putative [Plasmodium falciparum 3D7]
93 aa protein
accession:XP_001350215.1
mRNA splicing protein SME1 [Saccharomyces cerevisiae S288C]
94 aa protein
accession:NP_014802.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 100 | 100 | 94% | 2e-28 | 54.12% | NP_014802.3 | |
| 2 | 98.6 | 98.6 | 96% | 1e-27 | 53.57% | XP_063128007.1 | |
| 3 | 81.3 | 81.3 | 94% | 6e-21 | 46.34% | XP_002649120.1 | |
| 4 | 75.9 | 75.9 | 96% | 7e-19 | 44.05% | XP_001350215.1 | |
| 5 | 43.1 | 43.1 | 56% | 5e-06 | 36.73% | XP_040868607.1 |