Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_060903385.1 E3 ubiquitin-protein ligase rnf168 [Labrus mixtus] ... Query length: 389 aa

LON peptidase N-terminal domain and RING finger protein 3 isoform X2 ...

LON peptidase N-terminal domain and RING finger protein 3 isoform X2 [Glycine max]

395 aa protein

accession:XP_006599062.1

Alignment Sequence Identical proteins

zinc finger (C3HC4-type RING finger) family protein ...

zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]

913 aa protein

accession:NP_189369.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF168 ...

E3 ubiquitin-protein ligase RNF168 [Mus musculus]

567 aa protein

accession:NP_081631.2

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF168 ...

E3 ubiquitin-protein ligase RNF168 [Homo sapiens]

571 aa protein

accession:NP_689830.2

Alignment Sequence Identical proteins

Query: E3 ubiquitin-protein ligase rnf168 ...

E3 ubiquitin-protein ligase rnf168 [Labrus mixtus]

389 aa protein

accession:XP_060903385.1

Sequence Identical proteins

E3 ubiquitin-protein ligase rnf168 isoform X1 ...

E3 ubiquitin-protein ligase rnf168 isoform X1 [Danio rerio]

474 aa protein

accession:XP_021337022.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_021337022.1\|	E3 ubiquitin-protein ligase rnf168 isoform X1 [Danio rerio]	249	249	99%	2e-77	42.68%	XP_021337022.1
2 Select seq ref\|NP_081631.2\|	E3 ubiquitin-protein ligase RNF168 [Mus musculus]	162	211	78%	2e-43	42.02%	NP_081631.2
3 Select seq ref\|NP_689830.2\|	E3 ubiquitin-protein ligase RNF168 [Homo sapiens]	150	195	70%	5e-39	45.00%	NP_689830.2
4 Select seq ref\|XP_006599062.1\|	LON peptidase N-terminal domain and RING finger protein 3 isoform X2 [Glycine max]	72.8	72.8	20%	1e-12	43.75%	XP_006599062.1
5 Select seq ref\|NP_189369.1\|	zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]	65.5	65.5	26%	5e-10	36.27%	NP_189369.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments