Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_063123456.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1 [Rattus norvegicus]
...
Query length:
265 aa
DOMAINS: and other(s) domains
...
herzog, isoform B
...
herzog, isoform B [Drosophila melanogaster]
352 aa protein
accession:NP_001261912.1
CTD small phosphatase-like protein isoform 2
...
CTD small phosphatase-like protein isoform 2 [Homo sapiens]
265 aa protein
accession:NP_005799.2
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2
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carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Danio rerio]
265 aa protein
accession:XP_009303177.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 1
...
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 1 [Mus musculus]
302 aa protein
accession:NP_001408190.1
Query: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1
...
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1 [Rattus norvegicus]
265 aa protein
accession:XP_063123456.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2
...
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Rattus norvegicus]
265 aa protein
accession:XP_063123457.1
DOMAINS: and other(s) domains
...
herzog, isoform B [Drosophila melanogaster]
352 aa protein
accession:NP_001261912.1
CTD small phosphatase-like protein isoform 2 [Homo sapiens]
265 aa protein
accession:NP_005799.2
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Danio rerio]
265 aa protein
accession:XP_009303177.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 1 [Mus musculus]
302 aa protein
accession:NP_001408190.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1 [Rattus norvegicus]
265 aa protein
accession:XP_063123456.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Rattus norvegicus]
265 aa protein
accession:XP_063123457.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 503 | 503 | 91% | 0.0 | 100.00% | XP_063123457.1 | |
| 2 | 427 | 427 | 83% | 7e-152 | 83.91% | NP_001408190.1 | |
| 3 | 348 | 348 | 82% | 4e-121 | 76.02% | XP_009303177.1 | |
| 4 | 297 | 297 | 84% | 4e-101 | 68.70% | NP_005799.2 | |
| 5 | 272 | 272 | 71% | 7e-90 | 66.15% | NP_001261912.1 |