Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_063133453.1
pre-mRNA 3' end processing protein WDR33 isoform X5 [Rattus norvegicus]
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Query length:
279 aa
DOMAINS: and other(s) domains
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cleavage polyadenylation factor subunit PFS2
...
cleavage polyadenylation factor subunit PFS2 [Saccharomyces cerevisiae S288C]
465 aa protein
accession:NP_014082.1
WD40 repeat-containing protein
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WD40 repeat-containing protein [Dictyostelium discoideum AX4]
657 aa protein
accession:XP_002649088.2
pre-mRNA 3' end processing protein pfs-2
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pre-mRNA 3' end processing protein pfs-2 [Caenorhabditis elegans]
809 aa protein
accession:NP_001380152.1
pre-mRNA 3' end processing protein WDR33 isoform X5
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pre-mRNA 3' end processing protein WDR33 isoform X5 [Mus musculus]
244 aa protein
accession:XP_036017190.1
Query: pre-mRNA 3' end processing protein WDR33 isoform X5
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pre-mRNA 3' end processing protein WDR33 isoform X5 [Rattus norvegicus]
279 aa protein
accession:XP_063133453.1
pre-mRNA 3' end processing protein WDR33 isoform X4
...
pre-mRNA 3' end processing protein WDR33 isoform X4 [Rattus norvegicus]
308 aa protein
accession:XP_063133452.1
DOMAINS: and other(s) domains
...
cleavage polyadenylation factor subunit PFS2 [Saccharomyces cerevisiae S288C]
465 aa protein
accession:NP_014082.1
WD40 repeat-containing protein [Dictyostelium discoideum AX4]
657 aa protein
accession:XP_002649088.2
pre-mRNA 3' end processing protein pfs-2 [Caenorhabditis elegans]
809 aa protein
accession:NP_001380152.1
pre-mRNA 3' end processing protein WDR33 isoform X5 [Mus musculus]
244 aa protein
accession:XP_036017190.1
pre-mRNA 3' end processing protein WDR33 isoform X5 [Rattus norvegicus]
279 aa protein
accession:XP_063133453.1
pre-mRNA 3' end processing protein WDR33 isoform X4 [Rattus norvegicus]
308 aa protein
accession:XP_063133452.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 522 | 522 | 91% | 0.0 | 95.69% | XP_063133452.1 | |
| 2 | 513 | 513 | 86% | 0.0 | 100.00% | XP_036017190.1 | |
| 3 | 273 | 273 | 72% | 1e-86 | 59.80% | XP_002649088.2 | |
| 4 | 243 | 243 | 75% | 8e-74 | 54.63% | NP_001380152.1 | |
| 5 | 156 | 156 | 68% | 1e-43 | 40.91% | NP_014082.1 |