Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_063138106.1 charged multivesicular body protein 4c isoform X1 [Rattus norvegicus] ... Query length: 124 aa

Charged multivesicular body protein 4b ...

Charged multivesicular body protein 4b [Caenorhabditis elegans]

221 aa protein

accession:NP_001370608.1

Alignment Sequence Identical proteins

charged multivesicular body protein 4c ...

charged multivesicular body protein 4c [Danio rerio]

239 aa protein

accession:NP_001017844.1

Alignment Sequence Identical proteins

charged multivesicular body protein 4c ...

charged multivesicular body protein 4c [Homo sapiens]

233 aa protein

accession:NP_689497.1

Alignment Sequence Identical proteins

charged multivesicular body protein 4c ...

charged multivesicular body protein 4c [Mus musculus]

232 aa protein

accession:NP_079795.1

Alignment Sequence Identical proteins

Query: charged multivesicular body protein 4c isoform X1 ...

charged multivesicular body protein 4c isoform X1 [Rattus norvegicus]

124 aa protein

accession:XP_063138106.1

Sequence Identical proteins

charged multivesicular body protein 4c ...

charged multivesicular body protein 4c [Rattus norvegicus]

232 aa protein

accession:NP_001017466.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001017466.2\|	charged multivesicular body protein 4c [Rattus norvegicus]	254	254	100%	2e-86	100.00%	NP_001017466.2
2 Select seq ref\|NP_079795.1\|	charged multivesicular body protein 4c [Mus musculus]	244	244	100%	2e-82	95.97%	NP_079795.1
3 Select seq ref\|NP_689497.1\|	charged multivesicular body protein 4c [Homo sapiens]	179	179	100%	5e-57	84.80%	NP_689497.1
4 Select seq ref\|NP_001017844.1\|	charged multivesicular body protein 4c [Danio rerio]	103	103	100%	6e-27	56.35%	NP_001017844.1
5 Select seq ref\|NP_001370608.1\|	Charged multivesicular body protein 4b [Caenorhabditis elegans]	82.8	82.8	100%	4e-19	39.53%	NP_001370608.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments