Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_068072009.1
general transcription factor IIF subunit 1 isoform X6 [Danio rerio]
...
Query length:
537 aa
DOMAINS: and other(s) domains
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transcription factor IIFalpha
...
transcription factor IIFalpha [Drosophila melanogaster]
577 aa protein
accession:NP_524246.1
general transcription factor IIF subunit 1
...
general transcription factor IIF subunit 1 [Homo sapiens]
517 aa protein
accession:NP_002087.2
general transcription factor IIF subunit 1 isoform 2
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general transcription factor IIF subunit 1 isoform 2 [Mus musculus]
514 aa protein
accession:NP_001406388.1
general transcription factor IIF subunit 1
...
general transcription factor IIF subunit 1 [Rattus norvegicus]
508 aa protein
accession:NP_001007712.1
Query: general transcription factor IIF subunit 1 isoform X6
...
general transcription factor IIF subunit 1 isoform X6 [Danio rerio]
537 aa protein
accession:XP_068072009.1
general transcription factor IIF subunit 1 isoform X3
...
general transcription factor IIF subunit 1 isoform X3 [Danio rerio]
559 aa protein
accession:XP_068072001.1
DOMAINS: and other(s) domains
...
transcription factor IIFalpha [Drosophila melanogaster]
577 aa protein
accession:NP_524246.1
general transcription factor IIF subunit 1 [Homo sapiens]
517 aa protein
accession:NP_002087.2
general transcription factor IIF subunit 1 isoform 2 [Mus musculus]
514 aa protein
accession:NP_001406388.1
general transcription factor IIF subunit 1 [Rattus norvegicus]
508 aa protein
accession:NP_001007712.1
general transcription factor IIF subunit 1 isoform X6 [Danio rerio]
537 aa protein
accession:XP_068072009.1
general transcription factor IIF subunit 1 isoform X3 [Danio rerio]
559 aa protein
accession:XP_068072001.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1087 | 1087 | 100% | 0.0 | 100.00% | XP_068072001.1 | |
| 2 | 578 | 578 | 99% | 0.0 | 67.10% | NP_002087.2 | |
| 3 | 568 | 568 | 100% | 0.0 | 67.16% | NP_001406388.1 | |
| 4 | 567 | 567 | 99% | 0.0 | 67.16% | NP_001007712.1 | |
| 5 | 198 | 198 | 59% | 5e-55 | 45.12% | NP_524246.1 |