Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_951644.1
small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei brucei TREU927]
...
Query length:
109 aa
DOMAINS: and other(s) domains
...
putative small nuclear ribonucleoprotein-associated protein B
...
putative small nuclear ribonucleoprotein-associated protein B [Caenorhabditis elegans]
160 aa protein
accession:NP_493348.1
small nuclear ribonucleoprotein-associated protein B
...
small nuclear ribonucleoprotein-associated protein B [Glycine max]
281 aa protein
accession:XP_003545031.1
small nuclear ribonucleoprotein associated protein B
...
small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana]
257 aa protein
accession:NP_001031682.1
Sm snRNP core protein Smb1
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Sm snRNP core protein Smb1 [Schizosaccharomyces pombe]
147 aa protein
accession:NP_594151.1
Query: small nuclear ribonucleoprotein SmD1, putative
...
small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei brucei TREU927]
109 aa protein
accession:XP_951644.1
small nuclear ribonucleoprotein protein, putative
...
small nuclear ribonucleoprotein protein, putative [Leishmania donovani]
111 aa protein
accession:XP_003862040.1
DOMAINS: and other(s) domains
...
putative small nuclear ribonucleoprotein-associated protein B [Caenorhabditis elegans]
160 aa protein
accession:NP_493348.1
small nuclear ribonucleoprotein-associated protein B [Glycine max]
281 aa protein
accession:XP_003545031.1
small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana]
257 aa protein
accession:NP_001031682.1
Sm snRNP core protein Smb1 [Schizosaccharomyces pombe]
147 aa protein
accession:NP_594151.1
small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei brucei TREU927]
109 aa protein
accession:XP_951644.1
small nuclear ribonucleoprotein protein, putative [Leishmania donovani]
111 aa protein
accession:XP_003862040.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 116 | 116 | 99% | 9e-34 | 55.05% | XP_003862040.1 | |
| 2 | 63.9 | 63.9 | 71% | 1e-12 | 41.25% | NP_594151.1 | |
| 3 | 65.9 | 65.9 | 74% | 1e-12 | 41.86% | XP_003545031.1 | |
| 4 | 63.5 | 63.5 | 74% | 5e-12 | 41.18% | NP_001031682.1 | |
| 5 | 52.0 | 52.0 | 66% | 4e-08 | 36.49% | NP_493348.1 |