Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
YP_003029849.1
15 kD non-structural protein [Rat coronavirus Parker]
...
Query length:
133 aa
DOMAINS: and other(s) domains
...
gp5
...
gp5 [Murine hepatitis virus]
139 aa protein
accession:AAS17638.1
non-structural protein ns4
...
non-structural protein ns4 [Murine coronavirus MHV-JHM.IA]
139 aa protein
accession:ACN89764.1
accessory protein 4
...
accessory protein 4 [Murine hepatitis virus strain JHM]
139 aa protein
accession:YP_209234.1
RecName: Full=Non-structural protein 4; AltName: Full=15 kDa non-structural protein; AltName: Full=Accessory protein 4; AltName: Full=ns4
...
RecName: Full=Non-structural protein 4; AltName: Full=15 kDa non-structural protein; AltName: Full=Accessory protein 4; AltName: Full=ns4 [Rat coronavirus (strain 681)]
139 aa protein
accession:Q9IKD0.1
Query: 15 kD non-structural protein
...
15 kD non-structural protein [Rat coronavirus Parker]
133 aa protein
accession:YP_003029849.1
non-structural protein 4
...
non-structural protein 4 [Rat coronavirus]
133 aa protein
accession:AHA83609.1
DOMAINS: and other(s) domains
...
gp5 [Murine hepatitis virus]
139 aa protein
accession:AAS17638.1
non-structural protein ns4 [Murine coronavirus MHV-JHM.IA]
139 aa protein
accession:ACN89764.1
accessory protein 4 [Murine hepatitis virus strain JHM]
139 aa protein
accession:YP_209234.1
RecName: Full=Non-structural protein 4; AltName: Full=15 kDa non-structural protein; AltName: Full=Accessory protein 4; AltName: Full=ns4 [Rat coronavirus (strain 681)]
139 aa protein
accession:Q9IKD0.1
15 kD non-structural protein [Rat coronavirus Parker]
133 aa protein
accession:YP_003029849.1
non-structural protein 4 [Rat coronavirus]
133 aa protein
accession:AHA83609.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 261 | 261 | 96% | 2e-87 | 100.00% | Q9IKD0.1 | |
| 2 | 261 | 261 | 100% | 2e-87 | 96.24% | AHA83609.1 | |
| 3 | 231 | 231 | 97% | 2e-75 | 87.69% | AAS17638.1 | |
| 4 | 227 | 227 | 96% | 9e-74 | 86.05% | ACN89764.1 | |
| 5 | 227 | 227 | 96% | 9e-74 | 86.05% | YP_209234.1 |