Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_009420968.1 cytochrome c oxidase subunit II [Hypogymnia vittata] ... Query length: 241 aa

cytochrome oxidase subunit 2 ...

cytochrome oxidase subunit 2 [Schizosaccharomyces pombe]

248 aa protein

accession:YP_011104938.1

Alignment Sequence Identical proteins

Query: cytochrome c oxidase subunit II ...

cytochrome c oxidase subunit II [Hypogymnia vittata]

241 aa protein

accession:YP_009420968.1

Sequence Identical proteins

cytochrome c oxidase subunit 2 ...

cytochrome c oxidase subunit 2 [Saccharomyces cerevisiae S288C]

251 aa protein

accession:NP_009326.1

Alignment Sequence Identical proteins

cytochrome c oxidase subunit 2 ...

cytochrome c oxidase subunit 2 [Arabidopsis thaliana]

260 aa protein

accession:YP_009472098.2

Alignment Sequence Identical proteins

cytochrome c oxidase subunit 2, mitochondrial ...

cytochrome c oxidase subunit 2, mitochondrial [Glycine max]

376 aa protein

accession:NP_001276209.2

Alignment Sequence Identical proteins

cytochrome oxidase subunit 1 and subunit 2 ...

cytochrome oxidase subunit 1 and subunit 2 [Dictyostelium discoideum]

764 aa protein

accession:NP_050073.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_009326.1\|	cytochrome c oxidase subunit 2 [Saccharomyces cerevisiae S288C]	309	309	98%	9e-106	59.24%	NP_009326.1
2 Select seq ref\|YP_011104938.1\|	cytochrome oxidase subunit 2 [Schizosaccharomyces pombe]	303	303	98%	1e-103	57.56%	YP_011104938.1
3 Select seq ref\|YP_009472098.2\|	cytochrome c oxidase subunit 2 [Arabidopsis thaliana]	288	288	99%	1e-97	54.17%	YP_009472098.2
4 Select seq ref\|NP_001276209.2\|	cytochrome c oxidase subunit 2, mitochondrial [Glycine max]	288	288	99%	8e-96	54.17%	NP_001276209.2
5 Select seq ref\|NP_050073.1\|	cytochrome oxidase subunit 1 and subunit 2 [Dictyostelium discoideum]	256	256	100%	2e-79	47.10%	NP_050073.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments