Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
YP_173239.1
non-structural protein [Human coronavirus HKU1]
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Query length:
109 aa
DOMAINS: and other(s) domains
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RecName: Full=Non-structural protein 4; Short=ns4; AltName: Full=Accessory protein 4; AltName: Full=Non-structural protein of 12.5 kDa; Short=ns12.5; AltName: Full=Orf4 protein
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RecName: Full=Non-structural protein 4; Short=ns4; AltName: Full=Accessory protein 4; AltName: Full=Non-structural protein of 12.5 kDa; Short=ns12.5; AltName: Full=Orf4 protein [Human coronavirus HKU1 (isolate N5)]
109 aa protein
accession:Q0ZME6.1
nonstructural protein
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nonstructural protein [Human coronavirus HKU1]
109 aa protein
accession:XDF39975.1
Query: non-structural protein
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non-structural protein [Human coronavirus HKU1]
109 aa protein
accession:YP_173239.1
ORF4
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ORF4 [Human coronavirus HKU1]
109 aa protein
accession:XEQ84013.1
hypothetical protein
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hypothetical protein [Human coronavirus HKU1]
109 aa protein
accession:WCC60240.1
orf4 protein
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orf4 protein [Human coronavirus HKU1]
109 aa protein
accession:ADN03340.1
DOMAINS: and other(s) domains
...
RecName: Full=Non-structural protein 4; Short=ns4; AltName: Full=Accessory protein 4; AltName: Full=Non-structural protein of 12.5 kDa; Short=ns12.5; AltName: Full=Orf4 protein [Human coronavirus HKU1 (isolate N5)]
109 aa protein
accession:Q0ZME6.1
nonstructural protein [Human coronavirus HKU1]
109 aa protein
accession:XDF39975.1
non-structural protein [Human coronavirus HKU1]
109 aa protein
accession:YP_173239.1
ORF4 [Human coronavirus HKU1]
109 aa protein
accession:XEQ84013.1
hypothetical protein [Human coronavirus HKU1]
109 aa protein
accession:WCC60240.1
orf4 protein [Human coronavirus HKU1]
109 aa protein
accession:ADN03340.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 228 | 228 | 100% | 3e-75 | 99.08% | XEQ84013.1 | |
| 2 | 202 | 202 | 100% | 5e-65 | 84.40% | Q0ZME6.1 | |
| 3 | 226 | 226 | 100% | 2e-74 | 99.08% | ADN03340.1 | |
| 4 | 224 | 224 | 100% | 1e-73 | 98.17% | WCC60240.1 | |
| 5 | 213 | 213 | 93% | 5e-69 | 100.00% | XDF39975.1 |