Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_529805.1 ubiquitin [Agrotis segetum nucleopolyhedrovirus A] ... Query length: 78 aa

Query: ubiquitin ...

ubiquitin [Agrotis segetum nucleopolyhedrovirus A]

78 aa protein

accession:YP_529805.1

Sequence Identical proteins

ubiquitin-60S ribosomal protein L40 ...

ubiquitin-60S ribosomal protein L40 [Plasmodium falciparum 3D7]

128 aa protein

accession:XP_001350369.1

Alignment Sequence Identical proteins

Ubiquitin ...

Ubiquitin [Caenorhabditis elegans]

128 aa protein

accession:NP_499695.1

Alignment Sequence Identical proteins

ubiquitin-ribosomal protein eL40 fusion protein ...

ubiquitin-ribosomal protein eL40 fusion protein [Danio rerio]

128 aa protein

accession:NP_001032190.1

Alignment Sequence Identical proteins

ubiquitin-ribosomal 60S subunit protein L40A fusion protein ...

ubiquitin-ribosomal 60S subunit protein L40A fusion protein [Saccharomyces cerevisiae S288C]

128 aa protein

accession:NP_012118.1

Alignment Sequence Identical proteins

ubiquitin-60S ribosomal protein L40 fusion protein ...

ubiquitin-60S ribosomal protein L40 fusion protein [Schizosaccharomyces pombe]

128 aa protein

accession:NP_593923.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_001350369.1\|	ubiquitin-60S ribosomal protein L40 [Plasmodium falciparum 3D7]	137	137	98%	1e-42	80.52%	XP_001350369.1
2 Select seq ref\|NP_499695.1\|	Ubiquitin [Caenorhabditis elegans]	135	135	97%	7e-42	80.26%	NP_499695.1
3 Select seq ref\|NP_012118.1\|	ubiquitin-ribosomal 60S subunit protein L40A fusion protein [Saccharomyces cerevisiae S288C]	135	135	97%	1e-41	80.26%	NP_012118.1
4 Select seq ref\|NP_593923.1\|	ubiquitin-60S ribosomal protein L40 fusion protein [Schizosaccharomyces pombe]	135	135	97%	1e-41	80.26%	NP_593923.1
5 Select seq ref\|NP_001032190.1\|	ubiquitin-ribosomal protein eL40 fusion protein [Danio rerio]	135	135	97%	2e-41	80.26%	NP_001032190.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments