Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
1IM9_E
Chain E, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW-4 CW*0401 ALPHA CHAIN [Homo sapiens]
...
Query length:
276 aa
DOMAINS: and other(s) domains
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H-2 class I histocompatibility antigen, Q10 alpha chain precursor
...
H-2 class I histocompatibility antigen, Q10 alpha chain precursor [Mus musculus]
325 aa protein
accession:NP_034521.1
major histocompatibility complex, class I, B precursor
...
major histocompatibility complex, class I, B precursor [Homo sapiens]
362 aa protein
accession:NP_005505.2
major histocompatibility complex, class I, B isoform X3
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major histocompatibility complex, class I, B isoform X3 [Homo sapiens]
323 aa protein
accession:XP_054186781.1
Query: Chain E, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW-4 CW*0401 ALPHA CHAIN
...
Chain E, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW-4 CW*0401 ALPHA CHAIN [Homo sapiens]
276 aa protein
accession:1IM9_E
HLA class I histocompatibility antigen, C alpha chain precursor
...
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_001229971.1
HLA class I histocompatibility antigen, C alpha chain precursor
...
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_002108.4
DOMAINS: and other(s) domains
...
H-2 class I histocompatibility antigen, Q10 alpha chain precursor [Mus musculus]
325 aa protein
accession:NP_034521.1
major histocompatibility complex, class I, B precursor [Homo sapiens]
362 aa protein
accession:NP_005505.2
major histocompatibility complex, class I, B isoform X3 [Homo sapiens]
323 aa protein
accession:XP_054186781.1
Chain E, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, CW-4 CW*0401 ALPHA CHAIN [Homo sapiens]
276 aa protein
accession:1IM9_E
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_001229971.1
HLA class I histocompatibility antigen, C alpha chain precursor [Homo sapiens]
366 aa protein
accession:NP_002108.4
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 525 | 525 | 99% | 0.0 | 91.97% | NP_001229971.1 | |
| 2 | 431 | 431 | 99% | 2e-152 | 75.64% | NP_034521.1 | |
| 3 | 525 | 525 | 99% | 0.0 | 92.34% | NP_002108.4 | |
| 4 | 511 | 511 | 99% | 0.0 | 88.73% | NP_005505.2 | |
| 5 | 499 | 499 | 99% | 3e-179 | 87.96% | XP_054186781.1 |