Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8JH4_I
Chain I, DNA-directed RNA polymerase subunit [Komagataella phaffii]
...
Query length:
115 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase II complex subunit Rpb9
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DNA-directed RNA polymerase II complex subunit Rpb9 [Schizosaccharomyces pombe]
113 aa protein
accession:NP_594705.1
RNA polymerase II subunit I, isoform B
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RNA polymerase II subunit I, isoform B [Drosophila melanogaster]
129 aa protein
accession:NP_001247099.1
DNA-directed RNA polymerase II subunit RPB9
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DNA-directed RNA polymerase II subunit RPB9 [Danio rerio]
126 aa protein
accession:NP_001006013.2
RNA polymerases M/15 Kd subunit
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RNA polymerases M/15 Kd subunit [Arabidopsis thaliana]
114 aa protein
accession:NP_188323.1
Query: Chain I, DNA-directed RNA polymerase subunit
...
Chain I, DNA-directed RNA polymerase subunit [Komagataella phaffii]
115 aa protein
accession:8JH4_I
DNA-directed RNA polymerase II core subunit RPB9
...
DNA-directed RNA polymerase II core subunit RPB9 [Saccharomyces cerevisiae S288C]
122 aa protein
accession:NP_011445.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase II complex subunit Rpb9 [Schizosaccharomyces pombe]
113 aa protein
accession:NP_594705.1
RNA polymerase II subunit I, isoform B [Drosophila melanogaster]
129 aa protein
accession:NP_001247099.1
DNA-directed RNA polymerase II subunit RPB9 [Danio rerio]
126 aa protein
accession:NP_001006013.2
RNA polymerases M/15 Kd subunit [Arabidopsis thaliana]
114 aa protein
accession:NP_188323.1
Chain I, DNA-directed RNA polymerase subunit [Komagataella phaffii]
115 aa protein
accession:8JH4_I
DNA-directed RNA polymerase II core subunit RPB9 [Saccharomyces cerevisiae S288C]
122 aa protein
accession:NP_011445.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 179 | 179 | 95% | 9e-59 | 73.64% | NP_011445.1 | |
| 2 | 138 | 138 | 98% | 1e-42 | 53.98% | NP_594705.1 | |
| 3 | 120 | 120 | 96% | 4e-35 | 52.68% | NP_001247099.1 | |
| 4 | 114 | 114 | 89% | 1e-32 | 50.00% | NP_001006013.2 | |
| 5 | 112 | 112 | 97% | 3e-32 | 47.83% | NP_188323.1 |