Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
8JH4_L
Chain L, RNA polymerase subunit ABC10-alpha [Komagataella phaffii]
...
Query length:
72 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase subunit Rpc10
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DNA-directed RNA polymerase subunit Rpc10 [Schizosaccharomyces pombe]
63 aa protein
accession:NP_595688.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a
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DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a [Mus musculus]
99 aa protein
accession:NP_001034457.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4
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DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Danio rerio]
58 aa protein
accession:NP_001186035.1
RNA polymerase II, I and III subunit K
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RNA polymerase II, I and III subunit K [Drosophila melanogaster]
57 aa protein
accession:NP_001097319.1
Query: Chain L, RNA polymerase subunit ABC10-alpha
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Chain L, RNA polymerase subunit ABC10-alpha [Komagataella phaffii]
72 aa protein
accession:8JH4_L
DNA-directed RNA polymerase core subunit RPC10
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DNA-directed RNA polymerase core subunit RPC10 [Saccharomyces cerevisiae S288C]
70 aa protein
accession:NP_012013.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase subunit Rpc10 [Schizosaccharomyces pombe]
63 aa protein
accession:NP_595688.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a [Mus musculus]
99 aa protein
accession:NP_001034457.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Danio rerio]
58 aa protein
accession:NP_001186035.1
RNA polymerase II, I and III subunit K [Drosophila melanogaster]
57 aa protein
accession:NP_001097319.1
Chain L, RNA polymerase subunit ABC10-alpha [Komagataella phaffii]
72 aa protein
accession:8JH4_L
DNA-directed RNA polymerase core subunit RPC10 [Saccharomyces cerevisiae S288C]
70 aa protein
accession:NP_012013.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 86.3 | 86.3 | 100% | 4e-23 | 52.78% | NP_012013.1 | |
2 | 65.1 | 65.1 | 77% | 2e-14 | 46.43% | NP_001034457.1 | |
3 | 62.0 | 62.0 | 77% | 1e-13 | 42.86% | NP_001186035.1 | |
4 | 61.6 | 61.6 | 68% | 2e-13 | 48.98% | NP_001097319.1 | |
5 | 56.6 | 56.6 | 80% | 2e-11 | 39.66% | NP_595688.1 |