Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: AAD39175.1 MHC class II RT1.Ba [Rattus leucopus cooktownensis] ... Query length: 82 aa
HLA class II histocompatibility antigen, DO alpha chain precursor ...
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DQ alpha 2 chain precursor ...
HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens]
255 aa protein
accession:NP_064440.1
HLA class II histocompatibility antigen, DQ alpha 1 chain precursor ...
HLA class II histocompatibility antigen, DQ alpha 1 chain precursor [Homo sapiens]
255 aa protein
accession:NP_002113.2
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 ...
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens]
206 aa protein
accession:XP_006715142.1
Query: MHC class II RT1.Ba ...
MHC class II RT1.Ba [Rattus leucopus cooktownensis]
82 aa protein
accession:AAD39175.1
histocompatibility 2, class II antigen A, alpha precursor ...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2

Descriptions

Best hits

Select:AllNone Selected:0
Alignments Download
GenPept Show/hide columns of the table presenting best hits
Available columns







Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
130 130 100% 6e-3870.73% NP_034508.2
2
119 119 100% 1e-3360.98% NP_064440.1
3
118 118 100% 3e-3360.98% NP_002113.2
4
114 114 100% 3e-3260.98% XP_006715142.1
5
94.4 94.4 100% 4e-2453.66% NP_002110.1