Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AAH08118.1 POLR1C protein [Homo sapiens] ... Query length: 338 aa

DNA-directed RNA polymerase I and III subunit Rpc40 ...

DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]

348 aa protein

accession:NP_596831.1

Alignment Sequence Identical proteins

RNA polymerase I and III subunit C ...

RNA polymerase I and III subunit C [Drosophila melanogaster]

333 aa protein

accession:NP_608885.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerases I and III subunit RPAC1 ...

DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]

347 aa protein

accession:NP_956860.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerases I and III subunit RPAC1 ...

DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]

346 aa protein

accession:NP_033111.2

Alignment Sequence Identical proteins

Query: POLR1C protein ...

POLR1C protein [Homo sapiens]

338 aa protein

accession:AAH08118.1

Sequence Identical proteins

DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 ...

DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]

346 aa protein

accession:NP_976035.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_976035.1\|	DNA-directed RNA polymerases I and III subunit RPAC1 isoform 1 [Homo sapiens]	698	698	100%	0.0	100.00%	NP_976035.1
2 Select seq ref\|NP_033111.2\|	DNA-directed RNA polymerases I and III subunit RPAC1 [Mus musculus]	666	666	100%	0.0	94.08%	NP_033111.2
3 Select seq ref\|NP_956860.1\|	DNA-directed RNA polymerases I and III subunit RPAC1 [Danio rerio]	544	544	100%	0.0	72.19%	NP_956860.1
4 Select seq ref\|NP_608885.1\|	RNA polymerase I and III subunit C [Drosophila melanogaster]	356	356	92%	1e-121	54.14%	NP_608885.1
5 Select seq ref\|NP_596831.1\|	DNA-directed RNA polymerase I and III subunit Rpc40 [Schizosaccharomyces pombe]	343	343	96%	2e-116	51.66%	NP_596831.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments