Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ACP41858.1 RNA polymerase I [Heliosperma tommasinii] ... Query length: 88 aa

RNA polymerase I subunit B ...

RNA polymerase I subunit B [Drosophila melanogaster]

1129 aa protein

accession:NP_476708.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase I subunit RPA2 isoform X1 ...

DNA-directed RNA polymerase I subunit RPA2 isoform X1 [Mus musculus]

1081 aa protein

accession:XP_006499088.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase I subunit RPA2 isoform 2 ...

DNA-directed RNA polymerase I subunit RPA2 isoform 2 [Homo sapiens]

1079 aa protein

accession:NP_001131076.1

Alignment Sequence Identical proteins

Query: RNA polymerase I ...

RNA polymerase I [Heliosperma tommasinii]

88 aa protein

accession:ACP41858.1

Sequence Identical proteins

DNA-directed RNA polymerase I subunit 2 isoform X2 ...

DNA-directed RNA polymerase I subunit 2 isoform X2 [Glycine max]

1004 aa protein

accession:XP_006601019.1

Alignment Sequence Identical proteins

nuclear RNA polymerase A2 ...

nuclear RNA polymerase A2 [Arabidopsis thaliana]

1178 aa protein

accession:NP_564341.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_006601019.1\|	DNA-directed RNA polymerase I subunit 2 isoform X2 [Glycine max]	132	132	100%	3e-36	75.28%	XP_006601019.1
2 Select seq ref\|NP_564341.2\|	nuclear RNA polymerase A2 [Arabidopsis thaliana]	132	132	99%	3e-36	75.00%	NP_564341.2
3 Select seq ref\|NP_476708.1\|	RNA polymerase I subunit B [Drosophila melanogaster]	94.7	94.7	100%	6e-23	51.14%	NP_476708.1
4 Select seq ref\|XP_006499088.1\|	DNA-directed RNA polymerase I subunit RPA2 isoform X1 [Mus musculus]	87.4	87.4	99%	2e-20	51.72%	XP_006499088.1
5 Select seq ref\|NP_001131076.1\|	DNA-directed RNA polymerase I subunit RPA2 isoform 2 [Homo sapiens]	87.0	87.0	99%	3e-20	51.72%	NP_001131076.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments