Smart BLAST

Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ADX90244.1 RNA polymerase beta' subunit protein [Valeriana pseudofficinalis] ... Query length: 170 aa

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Synechocystis]

626 aa protein

accession:WP_190596344.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Microcystis]

626 aa protein

accession:WP_004163413.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta' ...

DNA-directed RNA polymerase subunit beta' [Clostridia]

1161 aa protein

accession:WP_003429485.1

Alignment Sequence Identical proteins

Query: RNA polymerase beta' subunit protein ...

RNA polymerase beta' subunit protein [Valeriana pseudofficinalis]

170 aa protein

accession:ADX90244.1

Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Arabidopsis thaliana]

680 aa protein

accession:NP_051050.1

Alignment Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Glycine max]

687 aa protein

accession:YP_538764.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051050.1\|	RNA polymerase beta' subunit [Arabidopsis thaliana]	324	324	100%	2e-107	92.35%	NP_051050.1
2 Select seq ref\|YP_538764.1\|	RNA polymerase beta' subunit [Glycine max]	321	321	100%	5e-106	90.59%	YP_538764.1
3 Select seq ref\|WP_190596344.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Synechocystis]	252	252	100%	6e-80	70.00%	WP_190596344.1
4 Select seq ref\|WP_004163413.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Microcystis]	251	251	100%	9e-80	70.00%	WP_004163413.1
5 Select seq ref\|WP_003429485.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta' [Clostridia]	246	246	100%	9e-75	64.71%	WP_003429485.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments