Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ADZ14167.1 recombination activating protein 1 [Hoplodactylus sp. Cromwell] ... Query length: 350 aa

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Danio rerio]

1057 aa protein

accession:NP_571464.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Rattus norvegicus]

1040 aa protein

accession:NP_445920.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Hoplodactylus sp. Cromwell]

350 aa protein

accession:ADZ14167.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	420	420	80%	1e-137	64.89%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	407	407	81%	6e-133	62.06%	NP_033045.2
3 Select seq ref\|NP_445920.1\|	V(D)J recombination-activating protein 1 [Rattus norvegicus]	405	405	80%	7e-132	62.63%	NP_445920.1
4 Select seq ref\|NP_571464.1\|	V(D)J recombination-activating protein 1 [Danio rerio]	184	184	82%	2e-50	30.33%	NP_571464.1
5 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	49.7	49.7	23%	5e-05	31.40%	NP_587701.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments