Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AEL31054.1 recombination activating protein 1 [Aetomylaeus maculatus] ... Query length: 302 aa

putative ubiquitin-protein ligase E3 ...

putative ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]

486 aa protein

accession:NP_596736.1

Alignment Sequence Identical proteins

DNA repair protein RAD5B isoform X1 ...

DNA repair protein RAD5B isoform X1 [Glycine max]

1099 aa protein

accession:XP_006605764.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Aetomylaeus maculatus]

302 aa protein

accession:AEL31054.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Danio rerio]

1057 aa protein

accession:NP_571464.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	337	337	98%	6e-107	53.54%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	325	325	98%	2e-102	51.52%	NP_033045.2
3 Select seq ref\|NP_571464.1\|	V(D)J recombination-activating protein 1 [Danio rerio]	266	266	98%	2e-80	45.20%	NP_571464.1
4 Select seq ref\|NP_596736.1\|	putative ubiquitin-protein ligase E3 [Schizosaccharomyces pombe]	47.8	47.8	16%	7e-05	42.86%	NP_596736.1
5 Select seq ref\|XP_006605764.1\|	DNA repair protein RAD5B isoform X1 [Glycine max]	47.4	47.4	13%	2e-04	44.19%	XP_006605764.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments