Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AER08641.1 pentatricopeptide repeat protein [Lumnitzera littorea] ... Query length: 56 aa

Pentatricopeptide repeat (PPR) superfamily protein ...

Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]

195 aa protein

accession:NP_001154759.1

Alignment Sequence Identical proteins

Query: pentatricopeptide repeat protein ...

pentatricopeptide repeat protein [Lumnitzera littorea]

56 aa protein

accession:AER08641.1

Sequence Identical proteins

uncharacterized protein At5g43822 isoform X2 ...

uncharacterized protein At5g43822 isoform X2 [Glycine max]

198 aa protein

accession:XP_006586169.1

Alignment Sequence Identical proteins

uncharacterized protein At5g43822 isoform X3 ...

uncharacterized protein At5g43822 isoform X3 [Glycine max]

187 aa protein

accession:XP_014634950.1

Alignment Sequence Identical proteins

uncharacterized protein At5g43822 isoform X1 ...

uncharacterized protein At5g43822 isoform X1 [Glycine max]

226 aa protein

accession:XP_040873623.1

Alignment Sequence Identical proteins

enhancer of mRNA-decapping protein 4 isoform X2 ...

enhancer of mRNA-decapping protein 4 isoform X2 [Glycine max]

644 aa protein

accession:XP_040873608.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_006586169.1\|	uncharacterized protein At5g43822 isoform X2 [Glycine max]	58.5	58.5	64%	3e-11	80.56%	XP_006586169.1
2 Select seq ref\|NP_001154759.1\|	Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]	48.1	48.1	100%	3e-07	51.79%	NP_001154759.1
3 Select seq ref\|XP_014634950.1\|	uncharacterized protein At5g43822 isoform X3 [Glycine max]	58.5	58.5	64%	3e-11	80.56%	XP_014634950.1
4 Select seq ref\|XP_040873623.1\|	uncharacterized protein At5g43822 isoform X1 [Glycine max]	57.8	57.8	64%	8e-11	80.56%	XP_040873623.1
5 Select seq ref\|XP_040873608.1\|	enhancer of mRNA-decapping protein 4 isoform X2 [Glycine max]	57.4	57.4	64%	2e-10	80.56%	XP_040873608.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments