Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AFU07578.1 hypoxia-inducible factor 3 alpha subunit [Lepisosteus platostomus] ... Query length: 483 aa

hypoxia-inducible factor 1-alpha isoform 3 ...

hypoxia-inducible factor 1-alpha isoform 3 [Mus musculus]

810 aa protein

accession:NP_001300849.1

Alignment Sequence Identical proteins

hypoxia-inducible factor 1-alpha isoform 2 ...

hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]

735 aa protein

accession:NP_851397.1

Alignment Sequence Identical proteins

Query: hypoxia-inducible factor 3 alpha subunit ...

hypoxia-inducible factor 3 alpha subunit [Lepisosteus platostomus]

483 aa protein

accession:AFU07578.1

Sequence Identical proteins

hypoxia inducible factor 1 subunit alpha, like ...

hypoxia inducible factor 1 subunit alpha, like [Danio rerio]

571 aa protein

accession:NP_956699.1

Alignment Sequence Identical proteins

hypoxia-inducible factor 3-alpha isoform X1 ...

hypoxia-inducible factor 3-alpha isoform X1 [Danio rerio]

626 aa protein

accession:XP_005157628.2

Alignment Sequence Identical proteins

hypoxia-inducible factor 3-alpha isoform X2 ...

hypoxia-inducible factor 3-alpha isoform X2 [Danio rerio]

619 aa protein

accession:XP_005157629.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_956699.1\|	hypoxia inducible factor 1 subunit alpha, like [Danio rerio]	516	516	99%	9e-179	57.06%	NP_956699.1
2 Select seq ref\|NP_001300849.1\|	hypoxia-inducible factor 1-alpha isoform 3 [Mus musculus]	374	374	81%	2e-120	47.15%	NP_001300849.1
3 Select seq ref\|NP_851397.1\|	hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]	369	369	81%	3e-119	45.73%	NP_851397.1
4 Select seq ref\|XP_005157629.2\|	hypoxia-inducible factor 3-alpha isoform X2 [Danio rerio]	516	516	99%	3e-178	57.06%	XP_005157629.2
5 Select seq ref\|XP_005157628.2\|	hypoxia-inducible factor 3-alpha isoform X1 [Danio rerio]	516	516	99%	4e-178	57.06%	XP_005157628.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments