Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AIE97019.1 regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote AD1000_89_E12] ... Query length: 650 aa

Query: regulator of nonsense transcripts 1 (UPF1, RENT1) ...

regulator of nonsense transcripts 1 (UPF1, RENT1) [uncultured marine group II/III euryarchaeote AD1000_89_E12]

650 aa protein

accession:AIE97019.1

Sequence Identical proteins

regulator of nonsense transcripts 1 isoform 1 ...

regulator of nonsense transcripts 1 isoform 1 [Homo sapiens]

1129 aa protein

accession:NP_001284478.1

Alignment Sequence Identical proteins

regulator of nonsense transcripts 1 isoform a ...

regulator of nonsense transcripts 1 isoform a [Mus musculus]

1124 aa protein

accession:NP_001116301.1

Alignment Sequence Identical proteins

regulator of nonsense transcripts 1 isoform X1 ...

regulator of nonsense transcripts 1 isoform X1 [Danio rerio]

1099 aa protein

accession:XP_005163697.1

Alignment Sequence Identical proteins

Upf1 RNA helicase, isoform B ...

Upf1 RNA helicase, isoform B [Drosophila melanogaster]

1180 aa protein

accession:NP_001285145.1

Alignment Sequence Identical proteins

RNA helicase ...

RNA helicase [Arabidopsis thaliana]

1254 aa protein

accession:NP_199512.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001284478.1\|	regulator of nonsense transcripts 1 isoform 1 [Homo sapiens]	327	327	97%	2e-97	34.56%	NP_001284478.1
2 Select seq ref\|NP_001116301.1\|	regulator of nonsense transcripts 1 isoform a [Mus musculus]	326	326	96%	2e-97	34.66%	NP_001116301.1
3 Select seq ref\|NP_001285145.1\|	Upf1 RNA helicase, isoform B [Drosophila melanogaster]	324	324	66%	2e-96	41.04%	NP_001285145.1
4 Select seq ref\|XP_005163697.1\|	regulator of nonsense transcripts 1 isoform X1 [Danio rerio]	322	322	78%	3e-96	38.49%	XP_005163697.1
5 Select seq ref\|NP_199512.2\|	RNA helicase [Arabidopsis thaliana]	323	323	66%	9e-96	41.55%	NP_199512.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments