Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ALI90630.1 PsbD [Phytocrene borneensis] ... Query length: 353 aa

Query: PsbD ...

PsbD [Phytocrene borneensis]

353 aa protein

accession:ALI90630.1

Sequence Identical proteins

photosystem II protein D2 ...

photosystem II protein D2 [Arabidopsis thaliana]

353 aa protein

accession:NP_051054.1

Alignment Sequence Identical proteins

photosystem II D2 protein (photosystem q(a) protein) ...

photosystem II D2 protein (photosystem q(a) protein) [Microcystis]

351 aa protein

accession:WP_002737445.1

Alignment Sequence Identical proteins

photosystem II D2 protein (photosystem q(a) protein) ...

photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]

349 aa protein

accession:WP_061432924.1

Alignment Sequence Identical proteins

photosystem II D2 protein (photosystem q(a) protein) ...

photosystem II D2 protein (photosystem q(a) protein) [Synechocystis]

352 aa protein

accession:WP_010872429.1

Alignment Sequence Identical proteins

photosystem II protein D2 ...

photosystem II protein D2 [Glycine max]

353 aa protein

accession:YP_538760.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051054.1\|	photosystem II protein D2 [Arabidopsis thaliana]	240	447	80%	1e-75	100.00%	NP_051054.1
2 Select seq ref\|YP_538760.1\|	photosystem II protein D2 [Glycine max]	240	451	80%	1e-75	100.00%	YP_538760.1
3 Select seq ref\|WP_002737445.1\|	MULTISPECIES: photosystem II D2 protein (photosystem q(a) protein) [Microcystis]	233	396	80%	1e-72	94.83%	WP_002737445.1
4 Select seq ref\|WP_061432924.1\|	photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]	232	389	76%	2e-72	94.83%	WP_061432924.1
5 Select seq ref\|WP_010872429.1\|	MULTISPECIES: photosystem II D2 protein (photosystem q(a) protein) [Synechocystis]	231	385	80%	7e-72	93.10%	WP_010872429.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments