Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AOV80848.1
MHC class II antigen alpha chain [Mus musculus]
...
Query length:
256 aa
DOMAINS: and other(s) domains
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H-2 class II histocompatibility antigen, A-Q alpha chain
...
H-2 class II histocompatibility antigen, A-Q alpha chain [Danio rerio]
257 aa protein
accession:XP_009302401.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
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HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054186783.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
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HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054187296.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
...
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
254 aa protein
accession:XP_054185776.1
Query: MHC class II antigen alpha chain
...
MHC class II antigen alpha chain [Mus musculus]
256 aa protein
accession:AOV80848.1
histocompatibility 2, class II antigen A, alpha precursor
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histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
DOMAINS: and other(s) domains
...
H-2 class II histocompatibility antigen, A-Q alpha chain [Danio rerio]
257 aa protein
accession:XP_009302401.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054186783.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054187296.1
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
254 aa protein
accession:XP_054185776.1
MHC class II antigen alpha chain [Mus musculus]
256 aa protein
accession:AOV80848.1
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 499 | 499 | 100% | 0.0 | 94.53% | NP_034508.2 | |
| 2 | 385 | 385 | 100% | 2e-135 | 73.05% | XP_054186783.1 | |
| 3 | 115 | 115 | 85% | 8e-30 | 31.42% | XP_009302401.1 | |
| 4 | 382 | 382 | 100% | 1e-134 | 72.66% | XP_054187296.1 | |
| 5 | 371 | 371 | 100% | 5e-130 | 71.88% | XP_054185776.1 |