Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: AVR48135.1 rhodopsin [Embassichthys bathybius] ... Query length: 352 aa

rhodopsin 6 ...

rhodopsin 6 [Drosophila melanogaster]

369 aa protein

accession:NP_524368.5

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Mus musculus]

348 aa protein

accession:NP_663358.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

extra-ocular rhodopsin ...

extra-ocular rhodopsin [Danio rerio]

354 aa protein

accession:NP_571287.1

Alignment Sequence Identical proteins

Query: rhodopsin ...

rhodopsin [Embassichthys bathybius]

352 aa protein

accession:AVR48135.1

Sequence Identical proteins

rhodopsin, like ...

rhodopsin, like [Danio rerio]

355 aa protein

accession:NP_001103501.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_663358.1\|	rhodopsin [Mus musculus]	563	563	100%	0.0	73.58%	NP_663358.1
2 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	546	546	100%	0.0	73.94%	NP_000530.1
3 Select seq ref\|NP_571287.1\|	extra-ocular rhodopsin [Danio rerio]	544	544	100%	0.0	73.16%	NP_571287.1
4 Select seq ref\|NP_524368.5\|	rhodopsin 6 [Drosophila melanogaster]	149	149	92%	1e-40	27.03%	NP_524368.5
5 Select seq ref\|NP_001103501.1\|	rhodopsin, like [Danio rerio]	544	544	93%	0.0	76.67%	NP_001103501.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments