Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
AYV78958.1
DNA-directed RNA polymerase subunit 6 [Edafosvirus sp.]
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Query length:
269 aa
DOMAINS: and other(s) domains
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Query: DNA-directed RNA polymerase subunit 6
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DNA-directed RNA polymerase subunit 6 [Edafosvirus sp.]
269 aa protein
accession:AYV78958.1
DNA-directed RNA polymerase subunit Rpb6
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DNA-directed RNA polymerase subunit Rpb6 [Schizosaccharomyces pombe]
142 aa protein
accession:NP_587956.1
DNA-directed RNA polymerase core subunit RPO26
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DNA-directed RNA polymerase core subunit RPO26 [Saccharomyces cerevisiae S288C]
155 aa protein
accession:NP_015513.1
putative DNA-directed RNA polymerases I, II, and III subunit RPABC2
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putative DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Caenorhabditis elegans]
137 aa protein
accession:NP_496278.1
DNA-directed RNA polymerases I, II, and III subunit RPABC2
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DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Mus musculus]
127 aa protein
accession:NP_081507.1
RNA polymerase II core subunit
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RNA polymerase II core subunit [Dictyostelium discoideum AX4]
133 aa protein
accession:XP_635429.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase subunit 6 [Edafosvirus sp.]
269 aa protein
accession:AYV78958.1
DNA-directed RNA polymerase subunit Rpb6 [Schizosaccharomyces pombe]
142 aa protein
accession:NP_587956.1
DNA-directed RNA polymerase core subunit RPO26 [Saccharomyces cerevisiae S288C]
155 aa protein
accession:NP_015513.1
putative DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Caenorhabditis elegans]
137 aa protein
accession:NP_496278.1
DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Mus musculus]
127 aa protein
accession:NP_081507.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
133 aa protein
accession:XP_635429.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 78.2 | 78.2 | 34% | 9e-17 | 44.09% | NP_587956.1 | |
| 2 | 73.2 | 73.2 | 40% | 1e-14 | 41.28% | NP_015513.1 | |
| 3 | 70.5 | 70.5 | 30% | 7e-14 | 39.02% | NP_496278.1 | |
| 4 | 68.9 | 68.9 | 29% | 3e-13 | 48.15% | XP_635429.1 | |
| 5 | 66.6 | 66.6 | 28% | 1e-12 | 42.31% | NP_081507.1 |