Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBG06239.1
MHC class II beta chain like protein [Triakis scyllium]
...
Query length:
170 aa
DOMAINS: and other(s) domains
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major histocompatibility complex class I UBA precursor
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major histocompatibility complex class I UBA precursor [Danio rerio]
348 aa protein
accession:NP_571546.1
Query: MHC class II beta chain like protein
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MHC class II beta chain like protein [Triakis scyllium]
170 aa protein
accession:BBG06239.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X5
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X5 [Homo sapiens]
154 aa protein
accession:XP_054187029.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X1
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X1 [Homo sapiens]
154 aa protein
accession:XP_054184470.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X2
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X2 [Homo sapiens]
175 aa protein
accession:XP_054186554.1
histocompatibility 2, O region beta locus isoform X1
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histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class I UBA precursor [Danio rerio]
348 aa protein
accession:NP_571546.1
MHC class II beta chain like protein [Triakis scyllium]
170 aa protein
accession:BBG06239.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X5 [Homo sapiens]
154 aa protein
accession:XP_054187029.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X1 [Homo sapiens]
154 aa protein
accession:XP_054184470.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X2 [Homo sapiens]
175 aa protein
accession:XP_054186554.1
histocompatibility 2, O region beta locus isoform X1 [Mus musculus]
200 aa protein
accession:XP_006523749.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 79.3 | 79.3 | 61% | 5e-18 | 37.72% | XP_054184470.1 | |
| 2 | 73.2 | 73.2 | 62% | 3e-15 | 33.64% | XP_006523749.1 | |
| 3 | 75.1 | 75.1 | 64% | 3e-15 | 36.84% | NP_571546.1 | |
| 4 | 79.0 | 79.0 | 61% | 7e-18 | 37.72% | XP_054187029.1 | |
| 5 | 79.7 | 79.7 | 61% | 8e-18 | 37.72% | XP_054186554.1 |