Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBG06242.1
MHC class II beta chain like protein [Triakis scyllium]
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Query length:
256 aa
DOMAINS: and other(s) domains
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Query: MHC class II beta chain like protein
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MHC class II beta chain like protein [Triakis scyllium]
256 aa protein
accession:BBG06242.1
uncharacterized protein LOC100002901
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uncharacterized protein LOC100002901 [Danio rerio]
250 aa protein
accession:NP_001091732.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X2
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X2 [Homo sapiens]
175 aa protein
accession:XP_054186554.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X5
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X5 [Homo sapiens]
154 aa protein
accession:XP_054187029.1
histocompatibility 2, class II antigen A, beta 1 precursor
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histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DP beta 1 chain isoform X1
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HLA class II histocompatibility antigen, DP beta 1 chain isoform X1 [Homo sapiens]
154 aa protein
accession:XP_054184470.1
DOMAINS: and other(s) domains
...
MHC class II beta chain like protein [Triakis scyllium]
256 aa protein
accession:BBG06242.1
uncharacterized protein LOC100002901 [Danio rerio]
250 aa protein
accession:NP_001091732.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X2 [Homo sapiens]
175 aa protein
accession:XP_054186554.1
HLA class II histocompatibility antigen, DP beta 1 chain isoform X5 [Homo sapiens]
154 aa protein
accession:XP_054187029.1
histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]
265 aa protein
accession:NP_996988.2
HLA class II histocompatibility antigen, DP beta 1 chain isoform X1 [Homo sapiens]
154 aa protein
accession:XP_054184470.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 97.4 | 97.4 | 71% | 5e-23 | 30.11% | NP_001091732.1 | |
| 2 | 92.0 | 92.0 | 48% | 1e-21 | 36.29% | XP_054186554.1 | |
| 3 | 86.7 | 86.7 | 65% | 7e-19 | 31.43% | NP_996988.2 | |
| 4 | 91.7 | 91.7 | 48% | 1e-21 | 36.29% | XP_054187029.1 | |
| 5 | 90.9 | 90.9 | 48% | 2e-21 | 35.48% | XP_054184470.1 |