Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
BBJ00832.1
MHC class II beta chain like protein 2 [Triakis scyllium]
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Query length:
257 aa
DOMAINS: and other(s) domains
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major histocompatibility complex class I-related gene protein isoform 2
...
major histocompatibility complex class I-related gene protein isoform 2 [Mus musculus]
270 aa protein
accession:NP_001341991.1
Query: MHC class II beta chain like protein 2
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MHC class II beta chain like protein 2 [Triakis scyllium]
257 aa protein
accession:BBJ00832.1
HLA class II histocompatibility antigen, DP beta 1 chain precursor
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HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
major histocompatibility complex, class II, DR beta 4 precursor
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major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
H-2 class II histocompatibility antigen, E-S beta chain isoform X2
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H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
H-2 class II histocompatibility antigen, E-S beta chain isoform X1
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H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class I-related gene protein isoform 2 [Mus musculus]
270 aa protein
accession:NP_001341991.1
MHC class II beta chain like protein 2 [Triakis scyllium]
257 aa protein
accession:BBJ00832.1
HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]
258 aa protein
accession:NP_002112.3
major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]
266 aa protein
accession:NP_068818.4
H-2 class II histocompatibility antigen, E-S beta chain isoform X2 [Danio rerio]
248 aa protein
accession:XP_002661942.3
H-2 class II histocompatibility antigen, E-S beta chain isoform X1 [Danio rerio]
249 aa protein
accession:XP_005168179.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 93.6 | 93.6 | 70% | 2e-21 | 30.50% | NP_002112.3 | |
2 | 91.3 | 91.3 | 89% | 1e-20 | 27.57% | XP_002661942.3 | |
3 | 91.3 | 91.3 | 81% | 1e-20 | 32.13% | NP_001341991.1 | |
4 | 90.9 | 90.9 | 70% | 2e-20 | 30.48% | NP_068818.4 | |
5 | 90.1 | 90.1 | 89% | 3e-20 | 27.87% | XP_005168179.1 |