Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001091732.1\|	uncharacterized protein LOC100002901 [Danio rerio]	82.0	82.0	94%	3e-19	40.91%	NP_001091732.1
2 Select seq ref\|XP_054187029.1\|	HLA class II histocompatibility antigen, DP beta 1 chain isoform X5 [Homo sapiens]	76.3	76.3	97%	7e-18	39.56%	XP_054187029.1
3 Select seq ref\|NP_996988.2\|	histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]	71.6	71.6	97%	3e-15	39.56%	NP_996988.2
4 Select seq ref\|XP_054186554.1\|	HLA class II histocompatibility antigen, DP beta 1 chain isoform X2 [Homo sapiens]	76.3	76.3	97%	1e-17	39.56%	XP_054186554.1
5 Select seq ref\|XP_054184470.1\|	HLA class II histocompatibility antigen, DP beta 1 chain isoform X1 [Homo sapiens]	75.5	75.5	97%	1e-17	38.46%	XP_054184470.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments