Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
C3Z1P5.1
RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Branchiostoma floridae]
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Query length:
221 aa
DOMAINS: and other(s) domains
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U1 small nuclear ribonucleoprotein C
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U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]
142 aa protein
accession:NP_001370586.1
U1 small nuclear ribonucleoprotein C
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U1 small nuclear ribonucleoprotein C [Homo sapiens]
159 aa protein
accession:NP_003084.1
U1 small nuclear ribonucleoprotein C isoform 1
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U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
U1 small nuclear ribonucleoprotein C
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U1 small nuclear ribonucleoprotein C [Danio rerio]
159 aa protein
accession:NP_775358.1
Query: RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C
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RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Branchiostoma floridae]
221 aa protein
accession:C3Z1P5.1
small ribonucleoprotein particle U1 subunit C
...
small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]
145 aa protein
accession:NP_650767.1
DOMAINS: and other(s) domains
...
U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]
142 aa protein
accession:NP_001370586.1
U1 small nuclear ribonucleoprotein C [Homo sapiens]
159 aa protein
accession:NP_003084.1
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
U1 small nuclear ribonucleoprotein C [Danio rerio]
159 aa protein
accession:NP_775358.1
RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Branchiostoma floridae]
221 aa protein
accession:C3Z1P5.1
small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]
145 aa protein
accession:NP_650767.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 130 | 130 | 29% | 4e-37 | 84.62% | NP_650767.1 | |
| 2 | 127 | 127 | 28% | 9e-36 | 87.10% | NP_003084.1 | |
| 3 | 126 | 126 | 28% | 1e-35 | 87.10% | NP_035562.1 | |
| 4 | 126 | 126 | 28% | 2e-35 | 87.10% | NP_775358.1 | |
| 5 | 112 | 112 | 28% | 4e-30 | 72.58% | NP_001370586.1 |