Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CAE2198615.1 unnamed protein product, partial [Vannella robusta] ... Query length: 155 aa

Query: unnamed protein product, partial ...

unnamed protein product, partial [Vannella robusta]

155 aa protein

accession:CAE2198615.1

Sequence Identical proteins

transcription factor SOX-17 ...

transcription factor SOX-17 [Danio rerio]

413 aa protein

accession:NP_571362.2

Alignment Sequence Identical proteins

transcription factor SOX-17 ...

transcription factor SOX-17 [Rattus norvegicus]

423 aa protein

accession:NP_001101372.1

Alignment Sequence Identical proteins

transcription factor SOX-17 isoform a ...

transcription factor SOX-17 isoform a [Mus musculus]

419 aa protein

accession:NP_001276393.1

Alignment Sequence Identical proteins

transcription factor SOX-17 ...

transcription factor SOX-17 [Homo sapiens]

414 aa protein

accession:NP_071899.1

Alignment Sequence Identical proteins

HMG box domain-containing protein ...

HMG box domain-containing protein [Caenorhabditis elegans]

438 aa protein

accession:NP_001317909.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_571362.2\|	transcription factor SOX-17 [Danio rerio]	51.6	51.6	41%	7e-07	32.81%	NP_571362.2
2 Select seq ref\|NP_001101372.1\|	transcription factor SOX-17 [Rattus norvegicus]	49.7	49.7	53%	3e-06	26.83%	NP_001101372.1
3 Select seq ref\|NP_001276393.1\|	transcription factor SOX-17 isoform a [Mus musculus]	49.7	49.7	53%	3e-06	26.83%	NP_001276393.1
4 Select seq ref\|NP_071899.1\|	transcription factor SOX-17 [Homo sapiens]	49.3	49.3	53%	4e-06	26.83%	NP_071899.1
5 Select seq ref\|NP_001317909.1\|	HMG box domain-containing protein [Caenorhabditis elegans]	46.2	46.2	41%	5e-05	30.77%	NP_001317909.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments