Smart BLAST

Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CAP11758.1 RNA polymerase beta subunit [Diospyros bejaudii] ... Query length: 124 aa

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]

1342 aa protein

accession:WP_000263098.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Synechocystis]

1102 aa protein

accession:WP_190596244.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta ...

DNA-directed RNA polymerase subunit beta [Microcystis]

1103 aa protein

accession:WP_061430915.1

Alignment Sequence Identical proteins

Query: RNA polymerase beta subunit ...

RNA polymerase beta subunit [Diospyros bejaudii]

124 aa protein

accession:CAP11758.1

Sequence Identical proteins

RNA polymerase beta subunit ...

RNA polymerase beta subunit [Arabidopsis thaliana]

1072 aa protein

accession:NP_051051.1

Alignment Sequence Identical proteins

RNA polymerase beta subunit ...

RNA polymerase beta subunit [Glycine max]

1070 aa protein

accession:YP_538763.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051051.1\|	RNA polymerase beta subunit [Arabidopsis thaliana]	234	234	100%	1e-71	88.71%	NP_051051.1
2 Select seq ref\|YP_538763.1\|	RNA polymerase beta subunit [Glycine max]	232	232	100%	7e-71	87.90%	YP_538763.1
3 Select seq ref\|WP_190596244.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta [Synechocystis]	150	150	100%	1e-41	54.55%	WP_190596244.1
4 Select seq ref\|WP_061430915.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta [Microcystis]	140	140	100%	3e-38	52.27%	WP_061430915.1
5 Select seq ref\|WP_000263098.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta [Enterobacteriaceae]	127	127	100%	1e-33	46.62%	WP_000263098.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments