Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: CAP11841.1 RNA polymerase beta' subunit [Diospyros bejaudii] ... Query length: 139 aa

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Synechocystis]

626 aa protein

accession:WP_190596344.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Microcystis]

626 aa protein

accession:WP_004163413.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta' ...

DNA-directed RNA polymerase subunit beta' [Clostridia]

1161 aa protein

accession:WP_003429485.1

Alignment Sequence Identical proteins

Query: RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Diospyros bejaudii]

139 aa protein

accession:CAP11841.1

Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Glycine max]

687 aa protein

accession:YP_538764.1

Alignment Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Arabidopsis thaliana]

680 aa protein

accession:NP_051050.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|YP_538764.1\|	RNA polymerase beta' subunit [Glycine max]	284	284	100%	2e-92	95.68%	YP_538764.1
2 Select seq ref\|NP_051050.1\|	RNA polymerase beta' subunit [Arabidopsis thaliana]	282	282	100%	1e-91	94.96%	NP_051050.1
3 Select seq ref\|WP_190596344.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Synechocystis]	204	204	97%	2e-62	71.85%	WP_190596344.1
4 Select seq ref\|WP_004163413.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Microcystis]	199	199	97%	3e-60	71.11%	WP_004163413.1
5 Select seq ref\|WP_003429485.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta' [Clostridia]	203	203	97%	3e-60	66.67%	WP_003429485.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments