Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001039482.1 splicing factor 3B subunit 6 [Bos taurus] ... Query length: 125 aa

splicing factor 3B subunit 6-like protein ...

splicing factor 3B subunit 6-like protein [Glycine max]

124 aa protein

accession:XP_003519509.1

Alignment Sequence Identical proteins

RNA-binding (RRM/RBD/RNP motifs) family protein ...

RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]

124 aa protein

accession:NP_196780.1

Alignment Sequence Identical proteins

RNA recognition motif-containing protein RRM ...

RNA recognition motif-containing protein RRM [Dictyostelium discoideum AX4]

117 aa protein

accession:XP_637842.1

Alignment Sequence Identical proteins

Splicing factor 3B subunit 6-like protein ...

Splicing factor 3B subunit 6-like protein [Caenorhabditis elegans]

138 aa protein

accession:NP_493659.3

Alignment Sequence Identical proteins

Query: splicing factor 3B subunit 6 ...

splicing factor 3B subunit 6 [Bos taurus]

125 aa protein

accession:NP_001039482.1

Sequence Identical proteins

splicing factor 3b subunit 6 ...

splicing factor 3b subunit 6 [Drosophila melanogaster]

121 aa protein

accession:NP_648037.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_648037.1\|	splicing factor 3b subunit 6 [Drosophila melanogaster]	195	195	92%	1e-64	77.39%	NP_648037.1
2 Select seq ref\|NP_493659.3\|	Splicing factor 3B subunit 6-like protein [Caenorhabditis elegans]	183	183	100%	1e-59	68.00%	NP_493659.3
3 Select seq ref\|XP_003519509.1\|	splicing factor 3B subunit 6-like protein [Glycine max]	176	176	97%	3e-57	64.46%	XP_003519509.1
4 Select seq ref\|NP_196780.1\|	RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]	172	172	97%	1e-55	63.64%	NP_196780.1
5 Select seq ref\|XP_637842.1\|	RNA recognition motif-containing protein RRM [Dictyostelium discoideum AX4]	157	157	86%	7e-50	65.74%	XP_637842.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments