Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001071779.1
nuclear receptor [Ciona intestinalis]
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Query length:
1054 aa
DOMAINS: and other(s) domains
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Query: nuclear receptor
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nuclear receptor [Ciona intestinalis]
1054 aa protein
accession:NP_001071779.1
nuclear receptor subfamily 4 group A member 1
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nuclear receptor subfamily 4 group A member 1 [Danio rerio]
574 aa protein
accession:NP_001002173.1
hormone receptor-like in 38, isoform D
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hormone receptor-like in 38, isoform D [Drosophila melanogaster]
836 aa protein
accession:NP_001163024.1
nuclear receptor subfamily 4 group A member 2 isoform a
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nuclear receptor subfamily 4 group A member 2 isoform a [Homo sapiens]
598 aa protein
accession:NP_006177.1
nuclear receptor subfamily 4 group A member 2 isoform X1
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nuclear receptor subfamily 4 group A member 2 isoform X1 [Homo sapiens]
609 aa protein
accession:XP_005246678.1
nuclear receptor subfamily 4 group A member 2 isoform a
...
nuclear receptor subfamily 4 group A member 2 isoform a [Mus musculus]
598 aa protein
accession:NP_001132981.1
DOMAINS: and other(s) domains
...
nuclear receptor [Ciona intestinalis]
1054 aa protein
accession:NP_001071779.1
nuclear receptor subfamily 4 group A member 1 [Danio rerio]
574 aa protein
accession:NP_001002173.1
hormone receptor-like in 38, isoform D [Drosophila melanogaster]
836 aa protein
accession:NP_001163024.1
nuclear receptor subfamily 4 group A member 2 isoform a [Homo sapiens]
598 aa protein
accession:NP_006177.1
nuclear receptor subfamily 4 group A member 2 isoform X1 [Homo sapiens]
609 aa protein
accession:XP_005246678.1
nuclear receptor subfamily 4 group A member 2 isoform a [Mus musculus]
598 aa protein
accession:NP_001132981.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 395 | 395 | 32% | 2e-124 | 55.16% | NP_001002173.1 | |
| 2 | 383 | 383 | 30% | 1e-119 | 58.84% | NP_006177.1 | |
| 3 | 383 | 383 | 30% | 1e-119 | 59.15% | NP_001132981.1 | |
| 4 | 364 | 364 | 30% | 7e-110 | 57.63% | NP_001163024.1 | |
| 5 | 382 | 382 | 30% | 3e-119 | 58.84% | XP_005246678.1 |