Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001100067.1
ubiquitin carboxyl-terminal hydrolase 39 isoform 1 [Rattus norvegicus]
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Query length:
568 aa
DOMAINS: and other(s) domains
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SAP DNA-binding domain-containing protein
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SAP DNA-binding domain-containing protein [Dictyostelium discoideum AX4]
718 aa protein
accession:XP_647829.1
ubiquitin specific protease 39
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ubiquitin specific protease 39 [Drosophila melanogaster]
494 aa protein
accession:NP_573334.1
U4/U6.U5 tri-snRNP-associated protein 2
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U4/U6.U5 tri-snRNP-associated protein 2 [Danio rerio]
497 aa protein
accession:NP_001073539.1
ubiquitin carboxyl-terminal hydrolase 39 isoform 1
...
ubiquitin carboxyl-terminal hydrolase 39 isoform 1 [Homo sapiens]
565 aa protein
accession:NP_001243654.1
Query: ubiquitin carboxyl-terminal hydrolase 39 isoform 1
...
ubiquitin carboxyl-terminal hydrolase 39 isoform 1 [Rattus norvegicus]
568 aa protein
accession:NP_001100067.1
ubiquitin carboxyl-terminal hydrolase 39 isoform X2
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ubiquitin carboxyl-terminal hydrolase 39 isoform X2 [Mus musculus]
573 aa protein
accession:XP_006506279.1
DOMAINS: and other(s) domains
...
SAP DNA-binding domain-containing protein [Dictyostelium discoideum AX4]
718 aa protein
accession:XP_647829.1
ubiquitin specific protease 39 [Drosophila melanogaster]
494 aa protein
accession:NP_573334.1
U4/U6.U5 tri-snRNP-associated protein 2 [Danio rerio]
497 aa protein
accession:NP_001073539.1
ubiquitin carboxyl-terminal hydrolase 39 isoform 1 [Homo sapiens]
565 aa protein
accession:NP_001243654.1
ubiquitin carboxyl-terminal hydrolase 39 isoform 1 [Rattus norvegicus]
568 aa protein
accession:NP_001100067.1
ubiquitin carboxyl-terminal hydrolase 39 isoform X2 [Mus musculus]
573 aa protein
accession:XP_006506279.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1162 | 1162 | 100% | 0.0 | 97.91% | XP_006506279.1 | |
| 2 | 1110 | 1110 | 96% | 0.0 | 96.91% | NP_001243654.1 | |
| 3 | 868 | 868 | 80% | 0.0 | 89.96% | NP_001073539.1 | |
| 4 | 625 | 625 | 79% | 0.0 | 65.27% | NP_573334.1 | |
| 5 | 467 | 467 | 79% | 3e-156 | 48.25% | XP_647829.1 |