Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001179361.2
RNA polymerase I-specific transcription initiation factor RRN3 [Bos taurus]
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Query length:
651 aa
DOMAINS: and other(s) domains
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ribosomal DNA (rDNA) transcription factor Rrn3
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ribosomal DNA (rDNA) transcription factor Rrn3 [Schizosaccharomyces pombe]
599 aa protein
accession:NP_001342810.1
Tif-IA
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Tif-IA [Drosophila melanogaster]
611 aa protein
accession:NP_788084.1
RNA polymerase I-specific transcription initiation factor RRN3
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RNA polymerase I-specific transcription initiation factor RRN3 [Danio rerio]
612 aa protein
accession:XP_005164166.1
RNA polymerase I-specific transcription initiation factor RRN3
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RNA polymerase I-specific transcription initiation factor RRN3 [Mus musculus]
656 aa protein
accession:NP_001034610.1
Query: RNA polymerase I-specific transcription initiation factor RRN3
...
RNA polymerase I-specific transcription initiation factor RRN3 [Bos taurus]
651 aa protein
accession:NP_001179361.2
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1
...
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 [Homo sapiens]
651 aa protein
accession:NP_060897.3
DOMAINS: and other(s) domains
...
ribosomal DNA (rDNA) transcription factor Rrn3 [Schizosaccharomyces pombe]
599 aa protein
accession:NP_001342810.1
Tif-IA [Drosophila melanogaster]
611 aa protein
accession:NP_788084.1
RNA polymerase I-specific transcription initiation factor RRN3 [Danio rerio]
612 aa protein
accession:XP_005164166.1
RNA polymerase I-specific transcription initiation factor RRN3 [Mus musculus]
656 aa protein
accession:NP_001034610.1
RNA polymerase I-specific transcription initiation factor RRN3 [Bos taurus]
651 aa protein
accession:NP_001179361.2
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 [Homo sapiens]
651 aa protein
accession:NP_060897.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1157 | 1157 | 99% | 0.0 | 90.49% | NP_060897.3 | |
| 2 | 1107 | 1107 | 100% | 0.0 | 86.32% | NP_001034610.1 | |
| 3 | 805 | 805 | 92% | 0.0 | 63.26% | XP_005164166.1 | |
| 4 | 269 | 269 | 92% | 3e-80 | 32.58% | NP_788084.1 | |
| 5 | 170 | 170 | 81% | 4e-44 | 24.77% | NP_001342810.1 |