Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001347459.1
class II histocompatibility antigen, M alpha chain precursor [Mus musculus]
...
Query length:
261 aa
DOMAINS: and other(s) domains
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H-2 class II histocompatibility antigen, A-Q alpha chain
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H-2 class II histocompatibility antigen, A-Q alpha chain [Danio rerio]
257 aa protein
accession:XP_009302401.1
histocompatibility 2, class II antigen A, alpha precursor
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histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DQ alpha 2 chain precursor
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HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens]
255 aa protein
accession:NP_064440.1
HLA class II histocompatibility antigen, DO alpha chain precursor
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HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
Query: class II histocompatibility antigen, M alpha chain precursor
...
class II histocompatibility antigen, M alpha chain precursor [Mus musculus]
261 aa protein
accession:NP_001347459.1
HLA class II histocompatibility antigen, DM alpha chain precursor
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HLA class II histocompatibility antigen, DM alpha chain precursor [Homo sapiens]
261 aa protein
accession:NP_006111.2
DOMAINS: and other(s) domains
...
H-2 class II histocompatibility antigen, A-Q alpha chain [Danio rerio]
257 aa protein
accession:XP_009302401.1
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens]
255 aa protein
accession:NP_064440.1
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
class II histocompatibility antigen, M alpha chain precursor [Mus musculus]
261 aa protein
accession:NP_001347459.1
HLA class II histocompatibility antigen, DM alpha chain precursor [Homo sapiens]
261 aa protein
accession:NP_006111.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 374 | 374 | 100% | 5e-131 | 75.86% | NP_006111.2 | |
| 2 | 107 | 107 | 74% | 1e-26 | 32.32% | NP_034508.2 | |
| 3 | 80.1 | 80.1 | 72% | 2e-16 | 31.61% | XP_009302401.1 | |
| 4 | 100 | 100 | 73% | 3e-24 | 29.44% | NP_002110.1 | |
| 5 | 99.4 | 99.4 | 79% | 1e-23 | 29.25% | NP_064440.1 |