Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_033250.3
U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
...
Query length:
448 aa
DOMAINS: and other(s) domains
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U1 small nuclear ribonucleoprotein 70 kDa isoform X1
...
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Glycine max]
481 aa protein
accession:XP_003517230.1
small ribonucleoprotein particle U1 subunit 70K, isoform C
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small ribonucleoprotein particle U1 subunit 70K, isoform C [Drosophila melanogaster]
448 aa protein
accession:NP_001260173.1
U1 small nuclear ribonucleoprotein 70 kDa
...
U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
495 aa protein
accession:NP_001003875.1
U1 small nuclear ribonucleoprotein 70 kDa isoform X1
...
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Mus musculus]
225 aa protein
accession:XP_011249133.1
Query: U1 small nuclear ribonucleoprotein 70 kDa
...
U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
448 aa protein
accession:NP_033250.3
U1 small nuclear ribonucleoprotein 70 kDa isoform 1
...
U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Homo sapiens]
437 aa protein
accession:NP_003080.2
DOMAINS: and other(s) domains
...
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Glycine max]
481 aa protein
accession:XP_003517230.1
small ribonucleoprotein particle U1 subunit 70K, isoform C [Drosophila melanogaster]
448 aa protein
accession:NP_001260173.1
U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
495 aa protein
accession:NP_001003875.1
U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Mus musculus]
225 aa protein
accession:XP_011249133.1
U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
448 aa protein
accession:NP_033250.3
U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Homo sapiens]
437 aa protein
accession:NP_003080.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 806 | 806 | 100% | 0.0 | 94.89% | NP_003080.2 | |
| 2 | 408 | 408 | 43% | 5e-142 | 98.47% | XP_011249133.1 | |
| 3 | 357 | 357 | 49% | 5e-118 | 91.03% | NP_001003875.1 | |
| 4 | 255 | 255 | 47% | 4e-79 | 68.40% | NP_001260173.1 | |
| 5 | 255 | 255 | 58% | 9e-79 | 53.58% | XP_003517230.1 |