Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_034511.3
histocompatibility 2, class II antigen E alpha precursor [Mus musculus]
...
Query length:
255 aa
DOMAINS: and other(s) domains
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mamu class II histocompatibility antigen, DR alpha chain-like
...
mamu class II histocompatibility antigen, DR alpha chain-like [Danio rerio]
236 aa protein
accession:XP_005167290.2
histocompatibility 2, class II antigen A, alpha precursor
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histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor
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HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor
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HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
Query: histocompatibility 2, class II antigen E alpha precursor
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histocompatibility 2, class II antigen E alpha precursor [Mus musculus]
255 aa protein
accession:NP_034511.3
HLA class II histocompatibility antigen, DR alpha chain precursor
...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
DOMAINS: and other(s) domains
...
mamu class II histocompatibility antigen, DR alpha chain-like [Danio rerio]
236 aa protein
accession:XP_005167290.2
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
histocompatibility 2, class II antigen E alpha precursor [Mus musculus]
255 aa protein
accession:NP_034511.3
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 386 | 386 | 98% | 4e-136 | 76.49% | NP_061984.2 | |
| 2 | 257 | 257 | 85% | 3e-85 | 55.50% | NP_034508.2 | |
| 3 | 121 | 121 | 91% | 3e-32 | 30.93% | XP_005167290.2 | |
| 4 | 268 | 268 | 100% | 2e-89 | 55.69% | NP_001229453.1 | |
| 5 | 264 | 264 | 96% | 5e-88 | 50.81% | NP_002110.1 |