Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_054172.1
hypothetical protein ACNVgp143 [Autographa californica nucleopolyhedrovirus]
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Query length:
261 aa
DOMAINS: and other(s) domains
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DUF19 domain-containing protein
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DUF19 domain-containing protein [Caenorhabditis elegans]
205 aa protein
accession:NP_001294769.1
DUF19 domain-containing protein
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DUF19 domain-containing protein [Caenorhabditis elegans]
140 aa protein
accession:NP_001294770.1
Query: hypothetical protein ACNVgp143
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hypothetical protein ACNVgp143 [Autographa californica nucleopolyhedrovirus]
261 aa protein
accession:NP_054172.1
RNA binding (RRM/RBD/RNP motifs) family protein
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RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
960 aa protein
accession:NP_001031437.2
RNA binding (RRM/RBD/RNP motifs) family protein
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RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
882 aa protein
accession:NP_180421.3
RNA binding (RRM/RBD/RNP motifs) family protein
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RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
985 aa protein
accession:NP_200825.2
DOMAINS: and other(s) domains
...
DUF19 domain-containing protein [Caenorhabditis elegans]
205 aa protein
accession:NP_001294769.1
DUF19 domain-containing protein [Caenorhabditis elegans]
140 aa protein
accession:NP_001294770.1
hypothetical protein ACNVgp143 [Autographa californica nucleopolyhedrovirus]
261 aa protein
accession:NP_054172.1
RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
960 aa protein
accession:NP_001031437.2
RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
882 aa protein
accession:NP_180421.3
RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
985 aa protein
accession:NP_200825.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 37.4 | 37.4 | 55% | 0.090 | 22.30% | NP_001294769.1 | |
| 2 | 37.7 | 37.7 | 18% | 0.12 | 37.74% | NP_001031437.2 | |
| 3 | 37.4 | 37.4 | 18% | 0.16 | 37.74% | NP_180421.3 | |
| 4 | 35.8 | 35.8 | 53% | 0.17 | 21.99% | NP_001294770.1 | |
| 5 | 36.6 | 36.6 | 18% | 0.25 | 37.74% | NP_200825.2 |