Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_061984.2
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
...
Query length:
254 aa
DOMAINS: and other(s) domains
...
mamu class II histocompatibility antigen, DR alpha chain-like
...
mamu class II histocompatibility antigen, DR alpha chain-like [Danio rerio]
236 aa protein
accession:XP_005167290.2
Query: HLA class II histocompatibility antigen, DR alpha chain precursor
...
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
HLA class II histocompatibility antigen, DO alpha chain precursor
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HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
histocompatibility 2, class II antigen A, alpha precursor
...
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2
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HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054187296.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor
...
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
DOMAINS: and other(s) domains
...
mamu class II histocompatibility antigen, DR alpha chain-like [Danio rerio]
236 aa protein
accession:XP_005167290.2
HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]
254 aa protein
accession:NP_061984.2
HLA class II histocompatibility antigen, DO alpha chain precursor [Homo sapiens]
250 aa protein
accession:NP_002110.1
histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]
256 aa protein
accession:NP_034508.2
HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X2 [Homo sapiens]
255 aa protein
accession:XP_054187296.1
HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]
260 aa protein
accession:NP_001229453.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 285 | 285 | 96% | 3e-96 | 54.66% | NP_002110.1 | |
| 2 | 281 | 281 | 97% | 8e-95 | 54.22% | NP_034508.2 | |
| 3 | 120 | 120 | 92% | 7e-32 | 32.49% | XP_005167290.2 | |
| 4 | 282 | 282 | 90% | 6e-95 | 62.61% | NP_001229453.1 | |
| 5 | 278 | 278 | 100% | 2e-93 | 54.12% | XP_054187296.1 |