Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_524764.1 cut, isoform A [Drosophila melanogaster] ... Query length: 2175 aa

homeobox protein cut-like 1 isoform X10 ...

homeobox protein cut-like 1 isoform X10 [Rattus norvegicus]

1511 aa protein

accession:XP_006249266.1

Alignment Sequence Identical proteins

homeobox protein cut-like 1 isoform X15 ...

homeobox protein cut-like 1 isoform X15 [Rattus norvegicus]

1489 aa protein

accession:XP_063127074.1

Alignment Sequence Identical proteins

Homeobox protein cut-like 1 isoform X16 ...

Homeobox protein cut-like 1 isoform X16 [Homo sapiens]

1392 aa protein

accession:XP_047275872.1

Alignment Sequence Identical proteins

cut, isoform E ...

cut, isoform E [Drosophila melanogaster]

2174 aa protein

accession:NP_001259310.1

Alignment Sequence Identical proteins

Query: cut, isoform A ...

cut, isoform A [Drosophila melanogaster]

2175 aa protein

accession:NP_524764.1

Sequence Identical proteins

cut, isoform D ...

cut, isoform D [Drosophila melanogaster]

2165 aa protein

accession:NP_001245565.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001259310.1\|	cut, isoform E [Drosophila melanogaster]	4431	4431	100%	0.0	99.95%	NP_001259310.1
2 Select seq ref\|XP_006249266.1\|	homeobox protein cut-like 1 isoform X10 [Rattus norvegicus]	198	1022	21%	3e-49	42.80%	XP_006249266.1
3 Select seq ref\|XP_047275872.1\|	Homeobox protein cut-like 1 isoform X16 [Homo sapiens]	197	1018	21%	5e-49	42.80%	XP_047275872.1
4 Select seq ref\|NP_001245565.1\|	cut, isoform D [Drosophila melanogaster]	3144	4068	91%	0.0	100.00%	NP_001245565.1
5 Select seq ref\|XP_063127074.1\|	homeobox protein cut-like 1 isoform X15 [Rattus norvegicus]	198	1020	21%	3e-49	42.80%	XP_063127074.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments