Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_851321.2 ligand-gated cation channel ZACN precursor [Homo sapiens] ... Query length: 412 aa

Query: ligand-gated cation channel ZACN precursor ...

ligand-gated cation channel ZACN precursor [Homo sapiens]

412 aa protein

accession:NP_851321.2

Sequence Identical proteins

5-hydroxytryptamine receptor 3E isoform a ...

5-hydroxytryptamine receptor 3E isoform a [Homo sapiens]

471 aa protein

accession:NP_872395.2

Alignment Sequence Identical proteins

5-hydroxytryptamine receptor 3A-like isoform X2 ...

5-hydroxytryptamine receptor 3A-like isoform X2 [Danio rerio]

467 aa protein

accession:XP_009294780.1

Alignment Sequence Identical proteins

neuronal acetylcholine receptor subunit alpha-6 precursor ...

neuronal acetylcholine receptor subunit alpha-6 precursor [Mus musculus]

494 aa protein

accession:NP_067344.2

Alignment Sequence Identical proteins

nicotinic acetylcholine receptor alpha5, isoform I ...

nicotinic acetylcholine receptor alpha5, isoform I [Drosophila melanogaster]

837 aa protein

accession:NP_001356885.1

Alignment Sequence Identical proteins

Ligand-gated ion channel 4 ...

Ligand-gated ion channel 4 [Caenorhabditis elegans]

635 aa protein

accession:NP_509556.4

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_872395.2\|	5-hydroxytryptamine receptor 3E isoform a [Homo sapiens]	105	105	86%	3e-23	25.57%	NP_872395.2
2 Select seq ref\|XP_009294780.1\|	5-hydroxytryptamine receptor 3A-like isoform X2 [Danio rerio]	103	103	85%	7e-23	23.04%	XP_009294780.1
3 Select seq ref\|NP_067344.2\|	neuronal acetylcholine receptor subunit alpha-6 precursor [Mus musculus]	71.6	71.6	64%	3e-12	22.14%	NP_067344.2
4 Select seq ref\|NP_509556.4\|	Ligand-gated ion channel 4 [Caenorhabditis elegans]	68.6	68.6	64%	4e-11	21.94%	NP_509556.4
5 Select seq ref\|NP_001356885.1\|	nicotinic acetylcholine receptor alpha5, isoform I [Drosophila melanogaster]	68.2	68.2	64%	7e-11	21.69%	NP_001356885.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments