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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: O12158.2 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN [HIV-1 M:C_92BR025] ... Query length: 1431 aa
Query: RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN ...
RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN [HIV-1 M:C_92BR025]
1431 aa protein
accession:O12158.2
uncharacterized protein Gm53480 ...
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
uncharacterized protein LOC110437969 ...
uncharacterized protein LOC110437969 [Danio rerio]
1319 aa protein
accession:XP_021322528.1
hypothetical protein DDB_G0281535 ...
hypothetical protein DDB_G0281535 [Dictyostelium discoideum AX4]
1322 aa protein
accession:XP_640704.2
uncharacterized protein LOC100782289 ...
uncharacterized protein LOC100782289 [Glycine max]
863 aa protein
accession:XP_006582654.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
uncharacterized protein Gm53480 [Mus musculus]
90.5 167 36% 1e-1628.39% XP_036010828.1
2
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
78.2 78.2 10% 4e-1329.41% XP_047305371.1
3
uncharacterized protein LOC110437969 [Danio rerio]
76.3 122 23% 3e-1228.33% XP_021322528.1
4
hypothetical protein DDB_G0281535 [Dictyostelium discoideum AX4]
68.6 68.6 12% 5e-1028.43% XP_640704.2
5
uncharacterized protein LOC100782289 [Glycine max]
64.7 64.7 11% 7e-0930.54% XP_006582654.1