Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P08411.2
RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Semliki Forest virus]
...
Query length:
2432 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4
...
RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Semliki Forest virus]
2432 aa protein
accession:P08411.2
poly ymerase 14-like [Danio rerio]
...
poly [ADP-ribose] polymerase 14-like [Danio rerio]
1827 aa protein
accession:XP_021327930.1
protein mono-ADP-ribosyltransferase PARP9 isoform a
...
protein mono-ADP-ribosyltransferase PARP9 isoform a [Mus musculus]
866 aa protein
accession:NP_001392228.1
poly ymerase 14 isoform X2 [Danio rerio]
...
poly [ADP-ribose] polymerase 14 isoform X2 [Danio rerio]
1853 aa protein
accession:XP_021327928.1
poly ymerase 14 isoform X3 [Danio rerio]
...
poly [ADP-ribose] polymerase 14 isoform X3 [Danio rerio]
1708 aa protein
accession:XP_021327929.1
poly ymerase 14 isoform X1 [Danio rerio]
...
poly [ADP-ribose] polymerase 14 isoform X1 [Danio rerio]
1222 aa protein
accession:XP_017213522.2
DOMAINS: and other(s) domains
...
RecName: Full=Polyprotein P1234; Short=P1234; AltName: Full=Non-structural polyprotein; Contains: RecName: Full=Polyprotein P123'; Short=P123'; Contains: RecName: Full=Polyprotein P123; Short=P123; Contains: RecName: Full=mRNA-capping enzyme nsP1; AltName: Full=Non-structural protein 1; Contains: RecName: Full=Protease nsP2; AltName: Full=Non-structural protein 2; Short=nsP2; Contains: RecName: Full=Non-structural protein 3; Short=nsP3; Contains: RecName: Full=Non-structural protein 3'; Short=nsP3'; Contains: RecName: Full=RNA-directed RNA polymerase nsP4; AltName: Full=Non-structural protein 4; Short=nsP4 [Semliki Forest virus]
2432 aa protein
accession:P08411.2
poly [ADP-ribose] polymerase 14-like [Danio rerio]
1827 aa protein
accession:XP_021327930.1
protein mono-ADP-ribosyltransferase PARP9 isoform a [Mus musculus]
866 aa protein
accession:NP_001392228.1
poly [ADP-ribose] polymerase 14 isoform X2 [Danio rerio]
1853 aa protein
accession:XP_021327928.1
poly [ADP-ribose] polymerase 14 isoform X3 [Danio rerio]
1708 aa protein
accession:XP_021327929.1
poly [ADP-ribose] polymerase 14 isoform X1 [Danio rerio]
1222 aa protein
accession:XP_017213522.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 52.0 | 52.0 | 5% | 1e-04 | 31.10% | XP_021327930.1 | |
2 | 40.4 | 40.4 | 4% | 0.33 | 28.46% | NP_001392228.1 | |
3 | 51.6 | 51.6 | 4% | 1e-04 | 35.20% | XP_021327929.1 | |
4 | 51.6 | 51.6 | 4% | 2e-04 | 35.20% | XP_021327928.1 | |
5 | 47.4 | 47.4 | 5% | 0.002 | 29.19% | XP_017213522.2 |